copyNIfTIHeader: Copy NIfTI Header to an array

Description Usage Arguments Value Examples

View source: R/copyNIfTIHeader.R

Description

Copies slots of a nifti object to an array. This is useful if you're subsetting 4D data and getting an array out

Usage

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copyNIfTIHeader(
  img,
  arr,
  drop_slots = c(".Data", "dim_"),
  drop = TRUE,
  onlylast = TRUE,
  warn = TRUE,
  ...
)

Arguments

img

object of class nifti to copy header

arr

array to copy header information

drop_slots

Slots not to copy over from header

drop

Should dropImageDimension be called before returning?

onlylast

if drop = TRUE, passed to dropImageDimension, if only the last dimensions should be dropped

warn

if drop = TRUE, passed to dropImageDimension, for warning print out

...

arguments to pass to nifti

Value

Object of class nifti the size of arr

Examples

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img = nifti(img = array(rnorm(10^4), dim=rep(10, 4)), dim=rep(10, 4), datatype = 16)
sub = img[,,,1:3]
copyNIfTIHeader(img, sub)
sub = img[,,,1, drop=FALSE]
copyNIfTIHeader(img, sub) 
copyNIfTIHeader(img, sub, drop = FALSE) 

neuroconductor-devel/neurobase documentation built on May 6, 2021, 1:48 p.m.