bf_parse_show_info: Parse output from 'showinf'

In neuroconductor/bftools: BioFormats Tools

Parse output from showinf

Description

Parse output from showinf

Usage

bf_parse_show_info(file)

Arguments

file	Output from showinf, a filename

Value

A list of output

Examples

file = "~/Downloads/2017_08_03__0006.czi"
if (file.exists(file)) {
res = showinf(file = file)
parsed = bf_parse_show_info(res)
res = showinf(file = file, debug = TRUE)
parsed2 = bf_parse_show_info(res)
testthat::expect_equal(parsed2$core, parsed$core)
testthat::expect_equal(parsed2$`series #0`, parsed$`series #0`)
}

neuroconductor/bftools documentation built on Feb. 7, 2023, 12:52 a.m.