Man pages for neuroconductor/ggsegExtra
Extra Utilities for the 'ggseg'-Plotting Tool
| annot2dpv | Convert annotation file to dpv |
| aparc_2_mesh | Converts annotations fo atlas |
| asc2ply | Convert ascii to .ply |
| atlas_lab2ctab | Label to ctab |
| atlas_vol2label | Volume to label |
| atlas_vol2surf | Nifti volume to surface |
| change_meshes | Change meshes to new system |
| check_fs | Check if FS can be run |
| ctab_line | Make a string for ctab writing |
| curv2asc | Convert Freesurfer curvature file to ascii |
| curv2ply | Convert Freesurfer curvature file to ply |
| curvnf2asc | Convert Freesurfer no fix curvature file to ascii |
| fs_curvatures | Available Freesurfer curvatures |
| fs_nofixcurv | Available Freesurfer no fix curvatures |
| fs_surfaces | Available Freesurfer surfaces |
| get_ctab | Get colour lut table |
| get_mesh | Extract mesh data from ply |
| getmode | Find the mode of a vector |
| ggseg_atlas_repos | List all online repositories with ggseg-atlases |
| install_ggseg_atlas | Install ggseg-atlas from repo |
| install_ggseg_atlas_all | Install all ggseg-atlases registeres |
| is_ctab | Check if object is colourtable |
| is_facewise | Check if dpv is facewise |
| isolate_region | Isolate region to alpha channel |
| lcbc_surf2surf | Convert LCBC surface file to other subjects |
| make_aparc_2_3datlas | Create cortical ggseg3d-atlas from annot-file |
| make_aseg_2_3datlas | Subcortical segmentation to atlas |
| make_ggseg3d_2_ggseg | Turn ggseg3d-atlas to ggseg |
| make_ggseg_repo | Initiate a ggseg atlas repo |
| make_palette_ggseg | Create ggseg palette from ggseg3d-atlas |
| mri_pretess | Run pre-tesselation on file |
| mris_annot2label | Convert annotation to label |
| mris_ca_label | MRI ca label |
| mris_label2annot | Convert Label to Annotation |
| mri_smooth | Smooth data |
| mri_tessellate | Tesselate data |
| mri_vol2label | Convert volume to label |
| mri_vol2surf | Convert volume to surface |
| prep_n_data | prep data for verteces/faces |
| read_annotation | Read Freesurfer annotation file |
| read_ctab | Read colourtab |
| read_dpv | Read dpv file |
| restruct_old_3datlas | Change old atlas setup to new |
| smooth2srf | Turn smooth file to ascii |
| snapshot_brain | Make snapshots through orca and plotly |
| subject_2_ascii | Convert subject surface files to ascii |
| surf2asc | Convert Freesurfer surface file to ascii |
| surf2ply | Convert Freesurfer surface file into ply |
| surfsplit | Split surface file into separate plys |
| write_ctab | Write colourtab |
| write_dpv | Write DPV file |
