Description Usage Arguments Value
View source: R/camino_fsl2scheme.R
Performs the Camino fsl2scheme
function
1 2 3 4 |
bvecs |
The file containing the b-vectors. |
bvals |
The file containing the b-values. |
outfile |
output filename for fsl scheme file |
diffusiontime |
Diffusion time in seconds |
bscale |
Scaling factor to convert the b-values into different units. Default is 10^6. |
flipx |
Negate the x component of all the vectors. |
flipy |
Negate the y component of all the vectors. |
flipz |
Negate the z component of all the vectors. |
interleave |
Interleave repeated scans.
Only used with |
zerobval |
Set an effective zero b-value, input b-values less than or equal to this are set to zero in the output. This is needed for some Camino programs that normalize the input data by dividing each measurement by the mean b=0 measurement. This value is tested after any applicable scaling is applied to the bvals. |
numscans |
Output all measurements number times, used when combining multiple scans from the same imaging session. The default behaviour is to repeat the entire block of measurements, like you'd get from copying and pasting the scheme number times. If -interleave is specified, then identical measurements are grouped together. |
usegradmod |
Use the gradient magnitude to scale b. This option has no effect if your gradient directions have unit magnitude. It should only be used if your scanner does not normalize the gradient directions. |
verbose |
Print diagnostic messages |
Output filename
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.