Files in neurodata/graphstats
Graph Statistics
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/bern_subgraph.R
R/data.R
R/dimselect.R
R/edge_xfms.R
R/embed.R
R/gclust.R
R/multiStart.r
R/nonpar.R
R/omni.R
R/plot.R
R/poisson.R
R/ptr.R
R/rdpg.R
R/rsp.R
R/sbm.R
R/semipar.R
R/sgc.R
R/sgm.R
R/siem.R
R/simulations.R
R/transforms.R
R/utils.R
R/vnsgm.R
R/xval.R
README.md
citation.bib
data/celegans.herm.chem.rda
data/celegans.herm.gap.rda
data/celegans.male.chem.rda
data/celegans.male.gap.rda
data/fly.mushroom.left.rda
data/fly.mushroom.right.rda
data/human.dmri.rda
data/human.female.dmri.rda
data/human.fmri.rda
data/human.male.dmri.rda
data/mouse.dmri.rda
docs/bern_ssg/bern_coherent_subgraph_estimation.Rmd
docs/bern_ssg/bern_graph_estimation.Rmd
docs/bern_ssg/bern_incoherent_subgraph_estimation.Rmd
docs/bern_ssg/bern_subgraph_estimation.Rmd
docs/connectome_coding/data/brodmann_res-1x1x1_lobes_res-1x1x1.csv
docs/connectome_coding/data/fly_mushroom.graphml
docs/connectome_coding/data/mouse_dmri.graphml
docs/connectome_coding/exploratory/ase.Rmd
docs/connectome_coding/exploratory/ase.html
docs/connectome_coding/exploratory/celegans.Rmd
docs/connectome_coding/exploratory/celegans.html
docs/connectome_coding/exploratory/fly.Rmd
docs/connectome_coding/exploratory/fly.html
docs/connectome_coding/exploratory/human.Rmd
docs/connectome_coding/exploratory/human.html
docs/connectome_coding/exploratory/mouse.Rmd
docs/connectome_coding/exploratory/mouse.html
docs/connectome_coding/exploratory/parse_graph.R
docs/connectome_coding/figures/connectome_coding.Rmd
docs/connectome_coding/figures/connectome_coding.nb.html
docs/siem/batch_bil.Rmd
docs/siem/batch_bil.html
docs/siem/batch_combined.Rmd
docs/siem/batch_combined.html
docs/siem/batch_combined.nb.html
docs/siem/batch_combined_v2.Rmd
docs/siem/batch_hem.Rmd
docs/siem/batch_hem.html
docs/siem/bilateral_across.Rmd
docs/siem/bilateral_across.html
docs/siem/bilateral_within.Rmd
docs/siem/bilateral_within.html
docs/siem/casessubset.rds
docs/siem/colors.rds
docs/siem/data/colors.rds
docs/siem/data/figure_4.rds
docs/siem/data/results_bil_case1.rds
docs/siem/data/results_bil_case2.rds
docs/siem/data/results_bil_case3.rds
docs/siem/data/results_bil_case4.rds
docs/siem/data/results_bil_case5.rds
docs/siem/data/results_bil_case6.rds
docs/siem/data/results_bil_pair.rds
docs/siem/data/results_bil_params.rds
docs/siem/data/results_case1.rds
docs/siem/data/results_hem_case1.rds
docs/siem/data/results_hem_case2.rds
docs/siem/data/results_hem_case3.rds
docs/siem/data/results_hem_case4.rds
docs/siem/data/results_hem_case5.rds
docs/siem/data/results_hem_case6.rds
docs/siem/data/results_hem_pair.rds
docs/siem/data/results_hem_params.rds
docs/siem/figure_4.Rmd
docs/siem/hemisphere_across.Rmd
docs/siem/hemisphere_across.html
docs/siem/hemisphere_within.Rmd
docs/siem/hemisphere_within.html
docs/siem/results_bil_case1.rds
docs/siem/results_bil_case2.rds
docs/siem/results_bil_case3.rds
docs/siem/results_bil_case4.rds
docs/siem/results_bil_case5.rds
docs/siem/results_bil_case6.rds
docs/siem/results_bil_params.rds
docs/siem/results_hem_case1.rds
docs/siem/results_hem_case2.rds
docs/siem/results_hem_case3.rds
docs/siem/results_hem_case4.rds
docs/siem/results_hem_case5.rds
docs/siem/results_hem_case6.rds
docs/siem/results_hem_params.rds
docs/siem/siem.Rmd
docs/siem/siem.html
graphstats.Rproj
man/celegans.herm.chem.Rd
man/celegans.herm.gap.Rd
man/celegans.male.chem.Rd
man/celegans.male.gap.Rd
man/fly.mushroom.left.Rd
man/fly.mushroom.right.Rd
man/gclust.Rd
man/gs.as_adj.Rd
man/gs.as_graph.Rd
man/gs.dim.select.Rd
man/gs.edge.log.Rd
man/gs.edge.ptr.Rd
man/gs.edge.threshold.Rd
man/gs.embed.Rd
man/gs.embed.ase.Rd
man/gs.embed.lse.Rd
man/gs.omni.Rd
man/gs.output.Rd
man/gs.plot.grid.Rd
man/gs.plot.heatmap.Rd
man/gs.plot.heatmap_overlay.Rd
man/gs.plot.matrix.pairs.Rd
man/gs.poisson.fit.zip.Rd
man/gs.sbm.fit.Rd
man/gs.siem.batch.perm.Rd
man/gs.siem.batch.tstat.Rd
man/gs.siem.fit.Rd
man/gs.siem.model.params.Rd
man/gs.siem.sample.test.Rd
man/gs.sims.er.Rd
man/gs.sims.latent_pos.Rd
man/gs.sims.sbm.Rd
man/gs.sims.siem.Rd
man/gs.ssg.bern.edge_test.Rd
man/gs.test.semipar.Rd
man/gs.utils.check_params.Rd
man/gs.xfm.apply_model.Rd
man/gs.xfm.rank_graph.Rd
man/gs.xfm.thresh_graph.Rd
man/gs.xval.split.Rd
man/human.dmri.Rd
man/human.female.dmri.Rd
man/human.fmri.Rd
man/human.male.dmri.Rd
man/model.var.Rd
man/mouse.dmri.Rd
man/multiStart.Rd
man/nonpar.Rd
man/ptr.Rd
man/rdpg.sample.correlated.Rd
man/rsp.Rd
man/sg.bern.compute_graph_statistics.Rd
man/sg.bern.estimator.Rd
man/sg.bern.graph_estimator.Rd
man/sg.bern.sample_graph.Rd
man/sg.bern.subgraph_classifier.Rd
man/sg.bern.subgraph_edge_estimation.Rd
man/sg.bern.subgraph_estimator.Rd
man/sg.bern.subgraph_train.Rd
man/sg.bern.xval_classifier.Rd
man/sgc.Rd
man/sgm.Rd
man/sgm.ordered.Rd
man/vnsgm.Rd
man/vnsgm.ordered.Rd
tests/testthat.R
tests/testthat/test-ase.R
tests/testthat/test-dimselect.R
tests/testthat/test-gclust.R
tests/testthat/test-lse.R
tests/testthat/test-nonpar.R
tests/testthat/test-sbm.R
tests/testthat/test-sgc.R
tests/testthat/test-sgm.R
tests/testthat/test-vnsgm.R
vignettes/ase.Rmd
vignettes/dimselect.Rmd
vignettes/gclust.Rmd
vignettes/lse.Rmd
vignettes/nonpar.Rmd
vignettes/sgc.Rmd
vignettes/sgm.Rmd
vignettes/siem.Rmd
vignettes/vn.Rmd
