neurogenomics/CHAS: Cell type deconvolution of bulk tissue histone acetylomes from epigenetic data
CHAS is an R package which integrates cell sorted H3K27ac data to identify cell type-specific peaks in bulk tissue H3K27ac profiles. Using the cell type-specific H3K27ac peaks, one can then calculate cell type-specific acetylation scores to act as a proxy for cell type proportion in the bulk tissue sample.
Getting started
Browse package contents
Package details |
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| Maintainer | |
| License | GPL (>= 3) + file LICENSE |
| Version | 0.99.9 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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