run_mf: Run Matrix Factorisation
In neurogenomics/CHAS: Cell type deconvolution of bulk tissue histone acetylomes from epigenetic data
run_mf R Documentation
Run Matrix Factorisation
Description
This function runs the matrix factorisation.
Usage
run_mf(bulkCPM, ref_median, ref_var, signature)
Arguments
bulkCPM
The bulk CPM data frame.
ref_median
The reference median data frame.
ref_var
The reference variability data frame.
signature
The signature vector.
Value
The EPIC scores.
neurogenomics/CHAS documentation built on Jan. 20, 2025, 4:03 p.m.
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| run_mf | R Documentation |
Run Matrix Factorisation
Description
This function runs the matrix factorisation.
Usage
run_mf(bulkCPM, ref_median, ref_var, signature)
Arguments
bulkCPM |
The bulk CPM data frame. |
ref_median |
The reference median data frame. |
ref_var |
The reference variability data frame. |
signature |
The signature vector. |
Value
The EPIC scores.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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