plot_celltype_annotations: Plot the proportions of peaks annotated to each cell type
In neurogenomics/CHAS: Cell type deconvolution of bulk tissue histone acetylomes from epigenetic data
View source: R/plot_celltype_annotations.R
plot_celltype_annotations R Documentation
Plot the proportions of peaks annotated to each cell type
Description
This function takes as input the output of the function CelltypeSpecificPeaks()
and uses the annotated bulk peaks to plot the proportion of each cell type.
Usage
plot_celltype_annotations(annotatedPeaks)
Arguments
annotatedPeaks
The output list of data frames from the function CelltypeSpecificPeaks()
containing the annotated bulk peaks and the cell type-specific bulk peaks.
Value
A stacked bar plot showing the proportion of each cell type in the bulk peak set.
neurogenomics/CHAS documentation built on Jan. 20, 2025, 4:03 p.m.
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View source: R/plot_celltype_annotations.R
| plot_celltype_annotations | R Documentation |
Plot the proportions of peaks annotated to each cell type
Description
This function takes as input the output of the function CelltypeSpecificPeaks() and uses the annotated bulk peaks to plot the proportion of each cell type.
Usage
plot_celltype_annotations(annotatedPeaks)
Arguments
annotatedPeaks |
The output list of data frames from the function CelltypeSpecificPeaks() containing the annotated bulk peaks and the cell type-specific bulk peaks. |
Value
A stacked bar plot showing the proportion of each cell type in the bulk peak set.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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