API for neurogenomics/CHAS
Cell type deconvolution of bulk tissue histone acetylomes from epigenetic data
| Global functions | |
|---|---|
| CelltypeProportion | Man page Source code |
| CelltypeScore | Man page Source code |
| CelltypeSpecificPeaks | Man page Source code |
| ConsensusPeaks | Man page Source code |
| EntorhinalCortex_AD_H3K27ac_counts | Man page |
| EntorhinalCortex_AD_H3K27ac_peaks | Man page |
| ReadCounting | Man page Source code |
| UnionPeaks | Man page Source code |
| astro_H3K27ac_hg19 | Man page |
| astro_H3K27ac_hg38 | Man page |
| calculate_cpm | Man page Source code |
| calculate_median_and_variability | Man page Source code |
| mgl_H3K27ac_hg19 | Man page |
| mgl_H3K27ac_hg38 | Man page |
| neu_H3K27ac_hg19 | Man page |
| neu_H3K27ac_hg38 | Man page |
| olig_H3K27ac_hg19 | Man page |
| olig_H3K27ac_hg38 | Man page |
| plot_MF_groups | Man page Source code |
| plot_MF_props | Man page Source code |
| plot_celltype_annotations | Man page Source code |
| plot_celltype_scores | Man page Source code |
| plot_correlation | Man page Source code |
| ref_H3K27ac_counts_hg19 | Man page |
| ref_H3K27ac_counts_hg38 | Man page |
| ref_H3K27ac_peaks_hg19 | Man page |
| ref_H3K27ac_peaks_hg38 | Man page |
| run_mf | Man page Source code |
| select_signature_peaks | Man page Source code |
