ewceData-Package: The ewceData package provides reference data required for...

In neurogenomics/ewceData: The ewceData package provides reference data required for ewce

The ewceData package provides reference data required for ewce

Description

This package provides reference data required for ewce. Expression Weighted Celltype Enrichment (EWCE) is used to determine which cell types are enriched within gene lists. The package provides tools for testing enrichments within simple gene lists (such as human disease associated genes) and those resulting from differential expression studies. The package does not depend upon any particular Single Cell Transcriptome dataset and user defined datasets can be loaded in and used in the analyses.

Arguments

metadata

logical value indicating whether metadata only should be returned or if the resource should be loaded. Default behavior(metadata=FALSE) loads the data.

Value

These accessor functions return differing dataset types

Source

These datasets have been sourced from various repositories, see the ExperimentHub database for details

Examples

  alzh_gwas_top100()

neurogenomics/ewceData documentation built on Oct. 29, 2023, 3:15 p.m.