neurogenomics/ewceData: The ewceData package provides reference data required for ewce

This package provides reference data required for ewce. Expression Weighted Celltype Enrichment (EWCE) is used to determine which cell types are enriched within gene lists. The package provides tools for testing enrichments within simple gene lists (such as human disease associated genes) and those resulting from differential expression studies. The package does not depend upon any particular Single Cell Transcriptome dataset and user defined datasets can be loaded in and used in the analyses.

Getting started

Package details

Bioconductor views ExperimentData ExperimentHub ExpressionData Genome MicroarrayData Proteome RNASeqData SequencingData SingleCellData
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
neurogenomics/ewceData documentation built on Oct. 29, 2023, 3:15 p.m.