Biocview "ExperimentData"

A data package containing two flowJo, one diva xml workspace and the associated fcs files as well as three GatingSets for testing the flowWorkspace, openCyto and CytoML packages.
A k-tables approach to integrate multiple Omics-Data
A k-tables approach to integrate multiple Omics-Data
ARACNe-inferred gene networks from TCGA tumor datasets
Bin annotation mm10
Böttcher et al. (2004) Comparative LC/MS-based profiling of silver nitrate-treated Arabidopsis thaliana leaves of wild-type and cyp79B2 cyp79B3 double knockout plants
Companion package to the 'Using R and Bioconductor for proteomics data analysis' publication
Data accompanying the pRoloc package
Data for Combination Connectivity Mapping (ccmap) Package
Data for TCGAbiolinks package
Data for TCGA Workflow
Data for the Harman package
Data for the VariantTools tutorial
Data package for JASPAR 2016
Data package for JASPAR 2018
Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.
Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.
Download datasets from EMBL-EBI Expression Atlas
Download datasets from EMBL-EBI Expression Atlas
Example ChIA-PET Datasets for the diffloop Package
Example data for the `artemis` package
Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data
Example data for the `sleuth` package
Example Files for the topdownr R Package
Example metadata for the "restfulSE" R package
Experimental Data Package for plethy
Exploring, analyzing and visualizing functions utilizing the PCxN database
Exposures, Gene Expression and Methylation data for ilustration purpouses
Exposures, Gene Expression and Methylation data for ilustration purpouses
Gene Expression Datasets for the 'MM2S' Package
GEO accession data GSE62944 as an ExpressionSet
Illumina 450k data on sorted cord blood cells
Implementation of the differential equation model described in "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay"
Implementation of the differential equation model described in "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay"
Linear Model decomposition for Designed Multivariate Experiments
Linear Model decomposition for Designed Multivariate Experiments
MIGSA vignette data
Pathway correlation coefficients and p values between pre-defined gene sets
Pathway fingerprint vectors representing a subsection of arrays from the GEO data repository
Position and normalized expression of Fantom's enhancers
Position and normalized expression of Fantom's enhancers
Position and normalized expression of Fantom's TSS
Pre-processed data for use with the CellMapper package
Processed BigWigs from BrainSpan for examples
Processed Hi-C from a variety of pre-processing platforms
Prostate Cancer Data
Prostate Cancer Data
Prostate Cancer Data
Prostate Cancer Data
Prostate Cancer Data
provides database to the AnimalGene2QTL package (Title Case)
Provides FACS Sorted Blood Cell Type DNA Methylation Reference Data to Estimate Blood Cellular Composition
Provides FACS Sorted Blood Cell Type DNA Methylation Reference Data to Estimate Blood Cellular Composition
QDNAseq bin annotation for hg19
Reproduce figures and simulations of OPWeight
Reproduce figures and simulations of OPWeight
Reproduce figures in IHW paper
Reproduce figures in IHW paper
Retrieves data from IMPC database
Retrieves data from IMPC database
Selected Single Cell RNA-seq datasets - due to Deng et al (2014), Jaitin et al (2014) and Zeisel et al (2015)
SuperCurve RPPA Sample Data
Synthetic Expression Data for Gene Regulatory Network Inference
Test dataset for RMassBank
Timer Quantification
VirtUaL ChIP-Seq data Analysis using Networks, dummy dataset
waveTiling Example Data