ExpressionAtlas: Download datasets from EMBL-EBI Expression Atlas

This package is for searching for datasets in EMBL-EBI Expression Atlas, and downloading them into R for further analysis. Each Expression Atlas dataset is represented as a SimpleList object with one element per platform. Sequencing data is contained in a SummarizedExperiment object, while microarray data is contained in an ExpressionSet or MAList object.

Package details

AuthorMaria Keays
Bioconductor views ArrayExpress ExperimentData ExpressionData MicroarrayData SequencingData
MaintainerSuhaib Mohammed <>
LicenseGPL (>= 3)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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ExpressionAtlas documentation built on Nov. 8, 2020, 5:39 p.m.