Biocview "ExpressionData"

Accessing The Datasets Of The Human Cell Atlas in R/Bioconductor

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

A Collection of Tumour Microenvironment Single-cell RNA Sequencing Datasets and Corresponding Metadata

A data package for timecourse RNA-seq and microarray gene expression data sets

An ExperimentHub package for accessing processed RLSuite data sets

An ExperimentHub Package for data sets with an Epithelial to Mesenchymal Transition (EMT)

CellScore Standard Cell Types Expression Dataset [hgu133plus2]

Collection of Bulk RNA-Seq Experiments With Many Replicates

Collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats

Collection of public MERFISH datasets

Collection of Public Single-Cell RNA-Seq Datasets

Collection of spatially resolved omics datasets

Collection of spatial transcriptomics datasets in SpatialExperiment Bioconductor format

Companion data package for the ReactomeGSA package

Curated Prostate Cancer Data

Data and Benchmarking Results from Korthauer and Kimes et al. (2019)

Data for Combination Connectivity Mapping (ccmap) Package

Data for NxtIRF

Data for the EpiMix package

Data for the Harman package

Data from the 10X 1.3 Million Brain Cell Study

Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment

Data package with transcript expression and bi-allelic genotypes from the GEUVADIS project

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

Datasets and test data files for the plotgardener package

Datasets for signatureSearch package

Dowloads A Gene Expression Dataset From GEO And Checks If It Contains Data Of Healthy Controls Or Not

Download datasets from EMBL-EBI Expression Atlas

Example Data Package for CellScore

Example metadata for the "restfulSE" R package

Experimental dataset from the rat BodyMap project

Exploring, analyzing and visualizing functions utilizing the pcxnData package

External data sets for clustifyr in ExperimentHub

Gene Expression Datasets for the 'MM2S' Package

GEO accession data GSE71585 as a SingleCellExperiment

Image masks and expression data for use with BrainImageR

Index of Reference Cell Type Datasets

LINCS Knock-Out Data Package

Mouse nanotube CAGE data

Multi-sample multi-group scRNA-seq data

Open Cancer TherApeutic Discovery (OCTAD) database

Pathway correlation coefficients and p values between pre-defined gene sets

Pathway fingerprint vectors representing a subsection of arrays from the GEO data repository

PBMC data from 10X Genomics

Predicting phenotypes from RNA-seq expression data

Pre-processed data for use with the CellMapper package

Prostate Cancer Data

Provide programmatic access to the tonsil cell atlas datasets

rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines

Reproduce figures and simulations of OPWeight

Reproduce figures in IHW paper

RNASeq datasets from The Cancer Genome Atlas Project from 2016-01-28

RNA-Seq Tutorial

R-side access to BioPlex protein-protein interaction data

Selected Single Cell RNA-seq datasets - due to Deng et al (2014), Jaitin et al (2014) and Zeisel et al (2015)

Single cell dataset from 10x in BUS format

Single-Cell -omics Data across Mouse Gastrulation and Early Organogenesis

Single-Cell Proteomics Data Package

Single-Cell Spatial Data

Single-cell Transcriptomics Data of the Ageing Mouse Thymus

Spatial allelic expression counts for fly cross embryo

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

Support package for the "Omics Data" course

Tau Scores For Human Kinases

Test Files for Single-Cell Droplet Utilities

The ewceData package provides reference data required for ewce

Transcriptomic Breast Cancer Datasets

Transcriptomic Ovarian Cancer Datasets

Transcriptomic Pancreatic Cancer Datasets

Tuberculosis Gene Expression Data for Machine Learning

Tumor, tumor-adjacent normal, and healthy colorectal transcriptomes as SummarizedExperiment objects

Biocview "ExpressionData"

R Package Documentation

Browse R Packages

We want your feedback!