shooshtarilab/scATAC.Explorer: A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

This package provides a tool to search and download a collection of publicly available single cell ATAC-seq datasets and their metadata. scATAC-Explorer aims to act as a single point of entry for users looking to study single cell ATAC-seq data. Users can quickly search available datasets using the metadata table and download datasets of interest for immediate analysis within R.

Getting started

Package details

Bioconductor views ExpressionData GEO Genome PackageTypeData SequencingData SingleCellData Tissue
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
shooshtarilab/scATAC.Explorer documentation built on July 1, 2022, 7:52 p.m.