Biocview "SingleCellData"

10x And SmartSeq2 Data From The Tabula Muris Consortium

Accessing The Datasets Of The Human Cell Atlas in R/Bioconductor

A Collection of Single-cell ATAC Sequencing Datasets and Corresponding Metadata

A Collection of Tumour Microenvironment Single-cell RNA Sequencing Datasets and Corresponding Metadata

Brain Data from Allen Institute Brain Atlas

Bulk and single-cell RNA-seq data from the Tabula Muris Senis project

Collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats

Collection of publicly available imaging mass cytometry (IMC) datasets

Collection of public MERFISH datasets

Collection of Public Single-Cell RNA-Seq Datasets

Collection of spatially resolved omics datasets

Collection of spatial transcriptomics datasets in SpatialExperiment Bioconductor format

Data and Benchmarking Results from Korthauer and Kimes et al. (2019)

Data, Clustering Results and Visualization Functions From Duò et al (2018)

Data from the 10X 1.3 Million Brain Cell Study

External data sets for clustifyr

External data sets for clustifyr in ExperimentHub

GEO accession data GSE71585 as a SingleCellExperiment

Integrating Multi-modal Single Cell Experiment datasets

Mappability tracks of Whole-genome Sequencing from the ENCODE Project

Multi-sample multi-group scRNA-seq data

PBMC data from 10X Genomics

Provide programmatic access to the tonsil cell atlas datasets

SCATE: Single-cell ATAC-seq Signal Extraction and Enhancement

Single cell dataset from 10x in BUS format

Single-Cell -omics Data across Mouse Gastrulation and Early Organogenesis

Single-Cell Proteomics Data Package

Single-Cell Spatial Data

Single-cell Transcriptomics Data of the Ageing Mouse Thymus

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

Strand-seq data for demonstration purposes

Test Files for Single-Cell Droplet Utilities

Test Single Package Builder

The ewceData package provides reference data required for ewce

The package contains examples of single cell data used in vignettes and examples of the scTHI package; data contain both tumor cells and immune cells from public dataset of glioma

Vectra Polaris and Vectra 3 multiplex single-cell imaging data

Biocview "SingleCellData"

R Package Documentation

Browse R Packages

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