shooshtarilab/TMExplorer: A Collection of Tumour Microenvironment Single-cell RNA Sequencing Datasets and Corresponding Metadata

This package provides a tool to search and download a collection of tumour microenvironment single-cell RNA sequencing datasets and their metadata. TMExplorer aims to act as a single point of entry for users looking to study the tumour microenvironment at the single cell level. Users can quickly search available datasets using the metadata table and then download the ones they are interested in for analysis.

Getting started

Package details

Bioconductor views CancerData ExpressionData GEO PackageTypeData RNASeqData SequencingData SingleCellData
Maintainer
LicenseArtistic-2.0
Version1.3.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("shooshtarilab/TMExplorer")
shooshtarilab/TMExplorer documentation built on May 22, 2021, 11:21 p.m.