Biocview "RNASeqData"

csoneson/TabulaMurisData

10x And SmartSeq2 Data From The Tabula Muris Consortium

federicomarini/HCAData

Accessing The Datasets Of The Human Cell Atlas in R/Bioconductor

shooshtarilab/TMExplorer

A Collection of Tumour Microenvironment Single-cell RNA Sequencing Datasets and Corresponding Metadata

NelleV/timecoursedata

A data package for timecourse RNA-seq and microarray gene expression data sets

Bishop-Laboratory/RLHub

An ExperimentHub package for accessing processed RLSuite data sets

DavisLaboratory/emtdata

An ExperimentHub Package for data sets with an Epithelial to Mesenchymal Transition (EMT)

drighelli/AllenInstituteBrainData

Brain Data from Allen Institute Brain Atlas

fmicompbio/TabulaMurisSenisData

Bulk and single-cell RNA-seq data from the Tabula Muris Senis project

const-ae/HighlyReplicatedRNASeq

Collection of Bulk RNA-Seq Experiments With Many Replicates

drisso/scRNAseq

Collection of Public Single-Cell RNA-Seq Datasets

LTLA/scRNAseq

Collection of Public Single-Cell RNA-Seq Datasets

reactome/ReactomeGSA.data

Companion data package for the ReactomeGSA package

Syksy/curatedPCaData

Curated Prostate Cancer Data

stephaniehicks/benchmarkfdrData2019

Data and Benchmarking Results from Korthauer and Kimes et al. (2019)

alexchwong/NxtIRFdata

Data for NxtIRF

gevaertlab/EpiMix.data

Data for the EpiMix package

Bioconductor/TENxBrainData

Data from the 10X 1.3 Million Brain Cell Study

LTLA/TENxBrainData

Data from the 10X 1.3 Million Brain Cell Study

miRmine

Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment

duxan/miRmine

Data package with miRNA-seq datasets from miRmine database as RangedSummarizedExperiment

markrobinsonuzh/GeuvadisTranscriptExpr

Data package with transcript expression and bi-allelic genotypes from the GEUVADIS project

gosianow/PasillaTranscriptExpr

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

markrobinsonuzh/PasillaTranscriptExpr

Data package with transcript expression obtained with kallisto from pasilla knock-down RNA-Seq data from Brooks et al.

olapuentesantana/easierData

easier internal data and exemplary dataset from IMvigor210CoreBiologies package

FelixErnst/RNAmodR.Data

Example data for the RNAmodR package

flaviusb/homosapienDEE2CellScore

Example Data Package for CellScore

stephaniehicks/bodymapRat

Experimental dataset from the rat BodyMap project

rnabioco/clustifyrdatahub

External data sets for clustifyr in ExperimentHub

flipflop

Fast lasso-based isoform prediction as a flow problem

Bioconductor/GSE62944

GEO accession data GSE62944 as a SummarizedExperiment

diogo-branco/allenpvc

GEO accession data GSE71585 as a SingleCellExperiment

LTLA/celldex

Index of Reference Cell Type Datasets

LTLA/CellTypeReferences

Index of Reference Cell Type Datasets

vjcitn/leeBamViews

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

kasperdanielhansen/TENxPBMCData

PBMC data from 10X Genomics

leekgroup/phenopredict

Predicting phenotypes from RNA-seq expression data

ShanEllis/phenopredict

Predicting phenotypes from RNA-seq expression data

leekgroup/derfinderData

Processed BigWigs from BrainSpan for examples

massonix/HCATonsilData

Provide programmatic access to the tonsil cell atlas datasets

mshasan/OPWpaper1

Reproduce figures and simulations of OPWeight

mshasan/OPWpaper

Reproduce figures and simulations of OPWeight

nignatiadis/IHWpaper

Reproduce figures in IHW paper

nignatiadis/ihwPaper

Reproduce figures in IHW paper

RTCGA/RTCGA.rnaseq.20160128

RNASeq datasets from The Cancer Genome Atlas Project from 2016-01-28

UPSCb/RnaSeqTutorial

RNA-Seq Tutorial

ccb-hms/BioPlex

R-side access to BioPlex protein-protein interaction data

kjohnsen/MMAPPR2data

Sample Data for MMAPPR2

kkdey/singlecellRNAseqData

Selected Single Cell RNA-seq datasets - due to Deng et al (2014), Jaitin et al (2014) and Zeisel et al (2015)

MarioniLab/MouseGastrulationData

Single-Cell -omics Data across Mouse Gastrulation and Early Organogenesis

mikelove/spatialDmelxsim

Spatial allelic expression counts for fly cross embryo

datapplab/SBGNview.data

Supporting datasets for SBGNview package

LTLA/DropletTestFiles

Test Files for Single-Cell Droplet Utilities

neurogenomics/ewceData

The ewceData package provides reference data required for ewce

BarcUVa-Seq/FieldEffectCrc

Tumor, tumor-adjacent normal, and healthy colorectal transcriptomes as SummarizedExperiment objects

cimbusch/tissueTreg

TWGBS and RNA-seq data from tissue T regulatory cells from mice