Flipflop discovers which isoforms of a gene are expressed in a given sample together with their abundances, based on RNA-Seq read data. It takes an alignment file in SAM format as input. It can also discover transcripts from several samples simultaneously, increasing statistical power.
|Author||Elsa Bernard, Laurent Jacob, Julien Mairal and Jean-Philippe Vert|
|Date of publication||None|
|Maintainer||Elsa Bernard <email@example.com>|