API for flipflop
Fast lasso-based isoform prediction as a flow problem

Global functions
R_SWIG_addCallbackFunctionStack Source code
R_SWIG_getCallbackFunctionStack Source code
SWIG_createNewRef Source code
WrapperFlipFlop Source code
WriteOutput Source code
assert Source code
bin.inside Source code
bins_paired Source code
calculate.cost Source code
coerceIfNotSubclass Source code
collect_path_grouplasso Source code
defineEnumeration Source code
duality_gap_poisson Source code
duality_gap_poisson_graph Source code
enumFromInteger Source code
enumToInteger Source code
find.prefix Source code
findpas Source code
findtss Source code
firstexon Source code
flipflop Man page Source code
graph_paired Source code
graph_single Source code
grouplassoPoisson Source code
lastexon Source code
loss.ll Source code
max_lambda Source code
modelselection Source code
processsam Source code
quickmatch Source code
refitPoisson Source code
refitSamples Source code
regularization_path Source code
regularization_path_grouplasso_dich Source code
spams_flipflop.evalPathCoding Source code
spams_flipflop.fistaFlat Source code
spams_flipflop.multLeftDiag Source code
spams_flipflop.sepCostsPathCoding Source code
spams_flipflop.solverPoisson Source code
spams_flipflop.solverPoissonFull Source code
startstop Source code
startstop_paired Source code
tic Source code
toc Source code
write.exons Source code
write.exons.short Source code
write.transcript Source code
write.transcript.short Source code
flipflop documentation built on Nov. 1, 2018, 4:03 a.m.