cimbusch/tissueTreg: TWGBS and RNA-seq data from tissue T regulatory cells from mice

The package provides ready to use epigenomes (obtained from TWGBS) and transcriptomes (RNA-seq) from various tissues as obtained in the study (Delacher and Imbusch 2017, PMID: 28783152). Regulatory T cells (Treg cells) perform two distinct functions: they maintain self-tolerance, and they support organ homeostasis by differentiating into specialized tissue Treg cells. The underlying dataset characterises the epigenetic and transcriptomic modifications for specialized tissue Treg cells.

Getting started

Package details

AuthorCharles Imbusch [aut, cre], Michael Delacher [aut], Markus Feuerer [aut], Benedikt Brors [aut]
Bioconductor views ExperimentData Mus_musculus_Data RNASeqData SequencingData Tissue
MaintainerCharles Imbusch <[email protected]>
LicenseGPL (>= 2)
Version0.99.4
URL https://github.com/cimbusch/tissueTreg
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("cimbusch/tissueTreg")
cimbusch/tissueTreg documentation built on May 3, 2019, 9 p.m.