lmweber/HDCytoData: Collection of high-dimensional cytometry benchmark datasets in Bioconductor object formats

Data package containing a set of publicly available high-dimensional cytometry benchmark datasets, formatted into SummarizedExperiment and flowSet Bioconductor object formats, including all required metadata. Row metadata includes sample IDs, group IDs, patient IDs, reference cell population or cluster labels (where available), and labels identifying 'spiked in' cells (where available). Column metadata includes channel names, protein marker names, and protein marker classes (cell type or cell state).

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Package details

Bioconductor views ExperimentData ExperimentHub ExpressionData FlowCytometryData Homo_sapiens_Data ImmunoOncologyData SingleCellData
LicenseMIT + file LICENSE
URL https://github.com/lmweber/HDCytoData
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
lmweber/HDCytoData documentation built on March 19, 2024, 4:41 a.m.