waldronlab/SingleCellMultiModal: Integrating Multi-modal Single Cell Experiment datasets

SingleCellMultiModal is an ExperimentHub package that serves multiple datasets obtained from GEO and other sources and represents them as MultiAssayExperiment objects. We provide several multi-modal datasets including scNMT, 10X Multiome, seqFISH, CITEseq, SCoPE2, and others. The scope of the package is is to provide data for benchmarking and analysis.

Getting started

Package details

Bioconductor views ExperimentData ExperimentHub GEO ReproducibleResearch SingleCellData
Maintainer
LicenseArtistic-2.0
Version1.5.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("waldronlab/SingleCellMultiModal")
waldronlab/SingleCellMultiModal documentation built on June 8, 2021, 5:26 p.m.