View source: R/SingleCellMultiModal.R
SingleCellMultiModal | R Documentation |
Combine multiple single cell modalities into one using the input of the individual functions.
SingleCellMultiModal(
DataTypes,
modes = "*",
versions = "1.0.0",
dry.run = TRUE,
verbose = TRUE,
...
)
DataTypes |
character() A vector of data types as indicated in each
individual function by the |
modes |
list() A list or CharacterList of modes for each data type where each element corresponds to one data type. |
versions |
character() A vector of versions for each DataType. By
default, version |
dry.run |
logical(1) Whether to return the dataset names before actual download (default TRUE) |
verbose |
logical(1) Whether to show the dataset currently being (down)loaded (default TRUE) |
... |
Additional arguments passed on to the ExperimentHub-class constructor |
A multi-modality MultiAssayExperiment
The metadata in the MultiAssayExperiment
contains the original
function call used to generate the object (labeled as call
),
a call_map
which provides traceability of technology functions to
DataType
prefixes, and lastly, R version information as version
.
SingleCellMultiModal(c("mouse_gastrulation", "pbmc_10x"),
modes = list(c("acc*", "met*"), "rna"),
version = c("2.0.0", "1.0.0"), dry.run = TRUE, verbose = TRUE
)
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