hidelab/pathprintGEOData: Pathway fingerprint vectors representing a subsection of arrays from the GEO data repository

Pathway Fingerprint vectors that have been pre-calculated for ~390,000 publicly available arrays from the GEO corpus, spanning 6 species and 31 platforms. All data are accompanied by their associated metadata.

Getting started

Package details

AuthorGabriel Altschuler, Sokratis Kariotis
Bioconductor views Caenorhabditis_elegans_Data Danio_rerio_Data Drosophila_melanogaster_Data ExperimentData ExpressionData GEO Genome Homo_sapiens_Data MicroarrayData Mus_musculus_Data OneChannelData PathwayInteractionDatabase Rattus_norvegicus_Data SequencingData TwoChannelData
MaintainerSokratis Kariotis <s.kariotis@sheffield.ac.uk>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
hidelab/pathprintGEOData documentation built on May 17, 2019, 3:58 p.m.