hidelab/pathprintGEOData: Pathway fingerprint vectors representing a subsection of arrays from the GEO data repository

Pathway Fingerprint vectors that have been pre-calculated for ~390,000 publicly available arrays from the GEO corpus, spanning 6 species and 31 platforms. All data are accompanied by their associated metadata.

Getting started

Package details

AuthorGabriel Altschuler, Sokratis Kariotis
Bioconductor views Caenorhabditis_elegans_Data Danio_rerio_Data Drosophila_melanogaster_Data ExperimentData ExpressionData GEO Genome Homo_sapiens_Data MicroarrayData Mus_musculus_Data OneChannelData PathwayInteractionDatabase Rattus_norvegicus_Data SequencingData TwoChannelData
MaintainerSokratis Kariotis <[email protected]>
LicenseGPL
Version1.9.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("hidelab/pathprintGEOData")
hidelab/pathprintGEOData documentation built on March 28, 2018, 9:38 a.m.