mitoODE: Implementation of the differential equation model described in "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay"
Version 1.14.0

The package contains the methods to fit a cell-cycle model on cell count data and the code to reproduce the results shown in our paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" by Pau, G., Walter, T., Neumann, B., Heriche, J.-K., Ellenberg, J., & Huber, W., BMC Bioinformatics (2013), 14(1), 308. doi:10.1186/1471-2105-14-308

Getting started

Package details

AuthorGregoire Pau
Bioconductor views CellBasedAssays ExperimentData Preprocessing TimeCourse
MaintainerGregoire Pau <pau.gregoire@gene.com>
LicenseLGPL
Version1.14.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("mitoODE")

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mitoODE documentation built on May 31, 2017, 12:36 p.m.