afukushima/MSEApdata: Metabolite-set data collection for pathway analysis in metabolomics

This package includes metabolite-set data collections that are utilized for the Metabolite Set Enrichment Analyses (MSEA) method for large-scale metabolite profiles. It includes Ecoli, Human and Mouse, and plants of the MetaCyc database (Caspi et al. NAR 44:D471-D480, 2016) and SMPDB (Jewison et al. NAR 42: D478-D484, 2014).

Getting started

Package details

Bioconductor views ExperimentData
MaintainerAtsushi Fukushima <[email protected]>
Licensefile LICENSE
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("afukushima/MSEApdata")
afukushima/MSEApdata documentation built on May 3, 2019, 11:52 p.m.