mset_Reactome_ATH_format_HMDB: A metabolite set (HMDB IDs) based on Reactome
In afukushima/MSEApdata: Metabolite-set data collection for pathway analysis in metabolomics
Description
Author(s)
References
Description
A metabolite set for Arabidopsis thaliana based on Reactome project. "Reactome" https://reactome.org/download-data/ (2018 Aug 5).
We converted https://reactome.org/download/current/ChEBI2Reactome.txt to
our metabolite set with HMDB IDs by using
https://github.com/afukushima/MSEApdata/blob/master/data-raw/reactome2cmt.py
This dataset contains 401 metabolite sets.
Author(s)
Kozo Nishida
References
Fabregat et al. 2018 PMID: 29145629
afukushima/MSEApdata documentation built on May 3, 2019, 11:52 p.m.
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Description Author(s) References
Description
A metabolite set for Arabidopsis thaliana based on Reactome project. "Reactome" https://reactome.org/download-data/ (2018 Aug 5). We converted https://reactome.org/download/current/ChEBI2Reactome.txt to our metabolite set with HMDB IDs by using https://github.com/afukushima/MSEApdata/blob/master/data-raw/reactome2cmt.py This dataset contains 401 metabolite sets.
Author(s)
Kozo Nishida
References
Fabregat et al. 2018 PMID: 29145629
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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