jfmpRASumm: Summary of relative abundance changes comparing JFMP results
In nevilamos/FAMEFMR: Functions For DELWP FAME Fire Analysis
jfmpRASumm R Documentation
Summary of relative abundance changes comparing JFMP results
Description
Summary of relative abundance changes comparing JFMP results
Usage
jfmpRASumm(
myDraftJfmpOut,
myGrpSpYearSummLong,
myTaxonList,
myStartBaseline,
myEndBaseline,
myJFMPSeason0
)
Arguments
myDraftJfmpOut
data.frame of autoJFMP joined to alternative draft JFMPs mad by function joinDraftJFMP()
myGrpSpYearSummLong
data.frame Long format relative abundances of species per PU and EFG and SEASON, created when calc_SpeciesRA() is run on FHAnalysis containing PU
myTaxonList
data.frame of species attributes (read from default or
user provided .csv)
myStartBaseline
first SEASON of years to use for calculation RA baseline
myEndBaseline
last SEASON of years to use for calculation RA baseline
myJFMPSeason0
the season before the commencement of the JFMP set in settings or shinyapp
Value
data.frame Summary per species for each JFMP and NoJFMP of change relative to baseline, thresholds and summed relative abundance
nevilamos/FAMEFMR documentation built on April 17, 2025, 9:32 p.m.
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| jfmpRASumm | R Documentation |
Summary of relative abundance changes comparing JFMP results
Description
Summary of relative abundance changes comparing JFMP results
Usage
jfmpRASumm(
myDraftJfmpOut,
myGrpSpYearSummLong,
myTaxonList,
myStartBaseline,
myEndBaseline,
myJFMPSeason0
)
Arguments
myDraftJfmpOut |
data.frame of autoJFMP joined to alternative draft JFMPs mad by function joinDraftJFMP() |
myGrpSpYearSummLong |
data.frame Long format relative abundances of species per PU and EFG and SEASON, created when calc_SpeciesRA() is run on FHAnalysis containing PU |
myTaxonList |
data.frame of species attributes (read from default or user provided .csv) |
myStartBaseline |
first SEASON of years to use for calculation RA baseline |
myEndBaseline |
last SEASON of years to use for calculation RA baseline |
myJFMPSeason0 |
the season before the commencement of the JFMP set in settings or shinyapp |
Value
data.frame Summary per species for each JFMP and NoJFMP of change relative to baseline, thresholds and summed relative abundance
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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