Files in nfj1380/mrIML
Multi-Response (Multivariate) Interpretable Machine Learning
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/.gitignore
R/MrFlashLight.R
R/archive/Features.R
R/archive/Responsedata.R
R/archive/gfData.R
R/archive/legacy.R
R/archive/mrPlotInteractions.R
R/mrBootstrap.R
R/mrCoOccurNet.R
R/mrCovar.R
R/mrIML-package.R
R/mrIMLperformance.R
R/mrIMLpredicts.R
R/mrInteractions.R
R/mrPdPlotBootstrap.R
R/mrPerformancePlot.R
R/mrVip.R
R/utils-pipe.R
R/utils.R
README.Rmd
README.md
_pkgdown.yml
cran-comments.md
data/archived-data/Features.rda
data/archived-data/Responsedata.rda
data/archived-data/asv_data.rda
data/archived-data/asv_taxa_table.rda
data/archived-data/biosecurity_vignette_data.rda
data/archived-data/gfData.rda
inst/extdata/GF SNPs posBinary.csv
inst/extdata/Landscape and host data.csv
inst/extdata/Landscape and host data.xlsx
inst/extdata/Simulation02_xdara.csv
inst/extdata/Simulation02_ydata.csv
inst/extdata/SimulationData01.csv
inst/extdata/SiteWS.csv
inst/extdata/grid101_binary.csv
inst/extdata/poplarSNP.ENV.data.4.GF.csv
man/.DS_Store
man/figures/.DS_Store
man/figures/README-unnamed-chunk-10-1.png
man/figures/README-unnamed-chunk-10-2.png
man/figures/README-unnamed-chunk-10-3.png
man/figures/README-unnamed-chunk-7-1.png
man/figures/README-unnamed-chunk-7-2.png
man/figures/README-unnamed-chunk-7-3.png
man/figures/README-unnamed-chunk-8-1.png
man/figures/README-unnamed-chunk-8-2.png
man/figures/README-unnamed-chunk-9-1.png
man/figures/README-unnamed-chunk-9-2.png
man/figures/README-unnamed-chunk-9-3.png
man/figures/README-unnamed-chunk-9-4.png
man/figures/fig1.png
man/figures/logo.png
man/figures/unnamed-chunk-10-1.png
man/figures/unnamed-chunk-8-1.png
man/figures/unnamed-chunk-8-2.png
man/figures/unnamed-chunk-9-1.png
man/figures/unnamed-chunk-9-2.png
man/figures/unnamed-chunk-9-3.png
man/figures/unnamed-chunk-9-4.png
man/filterRareCommon.Rd
man/mrBootstrap.Rd
man/mrCoOccurNet.Rd
man/mrCovar.Rd
man/mrFlashlight.Rd
man/mrIML-package.Rd
man/mrIMLperformance.Rd
man/mrIMLpredicts.Rd
man/mrInteractions.Rd
man/mrPdPlotBootstrap.Rd
man/mrPerformancePlot.Rd
man/mrVip.Rd
man/mrVipPCA.Rd
man/pipe.Rd
man/readSnpsPed.Rd
man/resist_components.Rd
mrIML.Rproj
pkgdown/.DS_Store
pkgdown/_pkgdown.yml
pkgdown/favicon/favicon.ico
tests/testthat.R
tests/testthat/test-mrIMLpredicts.R
vignettes/.DS_Store
vignettes/.gitignore
vignettes/articles/.gitignore
vignettes/articles/Common errors in mrIML.Rmd
vignettes/articles/Features.RData
vignettes/articles/Graphical network model (GNM).Rmd
vignettes/articles/Microbiome data curation.Rmd
vignettes/articles/Multi-response (classification).Rmd
vignettes/articles/Multi-response (regression).Rmd
vignettes/articles/Responsedata.RData
vignettes/articles/Swine biosecurity.Rmd
vignettes/articles/asv_data.RData
vignettes/articles/asv_taxa_table.RData
vignettes/articles/biosecurity_data.RData
vignettes/articles/gfData.RData
vignettes/man/figures/pdp-1.png
vignettes/man/figures/unnamed-chunk-10-1.png
vignettes/man/figures/unnamed-chunk-11-1.png
vignettes/man/figures/unnamed-chunk-11-2.png
vignettes/man/figures/unnamed-chunk-11-3.png
vignettes/man/figures/unnamed-chunk-12-1.png
vignettes/man/figures/unnamed-chunk-4-1.png
vignettes/man/figures/unnamed-chunk-4-2.png
vignettes/man/figures/unnamed-chunk-7-1.png
vignettes/man/figures/unnamed-chunk-8-1.png
vignettes/man/figures/unnamed-chunk-8-2.png
vignettes/man/figures/unnamed-chunk-9-1.png
vignettes/mrIML.Rmd
vignettes/vignettes/man/figures/unnamed-chunk-10-1.png
vignettes/vignettes/man/figures/unnamed-chunk-11-1.png
vignettes/vignettes/man/figures/unnamed-chunk-11-2.png
vignettes/vignettes/man/figures/unnamed-chunk-11-3.png
vignettes/vignettes/man/figures/unnamed-chunk-12-1.png
vignettes/vignettes/man/figures/unnamed-chunk-4-1.png
vignettes/vignettes/man/figures/unnamed-chunk-4-2.png
vignettes/vignettes/man/figures/unnamed-chunk-7-1.png
vignettes/vignettes/man/figures/unnamed-chunk-8-1.png
vignettes/vignettes/man/figures/unnamed-chunk-8-2.png
vignettes/vignettes/man/figures/unnamed-chunk-9-1.png
