loadKEGGPathways: Load KEGG pathways and names
In nguyentin/BLMA: BLMA: A package for bi-level meta-analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Load KEGG pathways and names
Usage
1
loadKEGGPathways(organism = "hsa", updateCache = FALSE)
Arguments
organism
organism code. Default value is "hsa" (human)
updateCache
re-download KEGG pathways. Default value is FALSE
Value
A list of the following components
-
kpg a list of graphNEL objects
encoding the pathway information.
-
kpn a named vector of pathway tiles.
The names of the vector are the pathway KEGG IDs.
Author(s)
Tin Nguyen and Sorin Draghici
See Also
keggPathwayGraphs, keggPathwayNames
Examples
1
x <- loadKEGGPathways()
nguyentin/BLMA documentation built on May 23, 2019, 4:43 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Load KEGG pathways and names
Usage
1 | loadKEGGPathways(organism = "hsa", updateCache = FALSE)
|
Arguments
organism |
organism code. Default value is "hsa" (human) |
updateCache |
re-download KEGG pathways. Default value is FALSE |
Value
A list of the following components
-
kpg a list of
graphNELobjects encoding the pathway information. -
kpn a named vector of pathway tiles. The names of the vector are the pathway KEGG IDs.
Author(s)
Tin Nguyen and Sorin Draghici
See Also
keggPathwayGraphs, keggPathwayNames
Examples
1 | x <- loadKEGGPathways()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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