Bird.phy.distances: Phylogenetic pairwise distance matrix for all avian species...
In nicholasjclark/BBS.occurrences: BBS community composition and co-occurrence analysis
Description
A pairwise phylogenetic distance matrices was created
using functions in the ape package. 100 phylogenetic trees were
downloaded from Birdtree.org and used to calculate mean pairwise distance. The pairwise
distances were then scaled to range [0, 1]. The
entire workflow is shown in the Appendix S4 script.
Usage
1
data("Bird.phy.distances")
Format
A matrix object with 303 rows and 303 columns, where each cell lists the
scaled pairwise phylogenetic distance between species in the corresponding row and column.
Row and column orders match the column orders in the BBS.abundances
and BBS.occurrences datafiles
nicholasjclark/BBS.occurrences documentation built on July 19, 2020, 8:31 p.m.
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Description
A pairwise phylogenetic distance matrices was created
using functions in the ape package. 100 phylogenetic trees were
downloaded from Birdtree.org and used to calculate mean pairwise distance. The pairwise
distances were then scaled to range [0, 1]. The
entire workflow is shown in the Appendix S4 script.
Usage
1 | data("Bird.phy.distances")
|
Format
A matrix object with 303 rows and 303 columns, where each cell lists the
scaled pairwise phylogenetic distance between species in the corresponding row and column.
Row and column orders match the column orders in the BBS.abundances
and BBS.occurrences datafiles
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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