polySimIBD: Structured Wright Fisher Simulator for Malaria Genetics

polySimIBDR Documentation

Structured Wright Fisher Simulator for Malaria Genetics

Description

Unique features of the malaria life-cycle and transmission dynamics requires extensions of typical population genetic simulators. Using a spatial discrete-loci, discrete-time structured Wright Fisher model, we simulate malaria population genetics forwards in time. Users are then able to capture the full Ancestral Recombination Graph.


nickbrazeau/polySimIBD documentation built on Sept. 26, 2024, 5:29 p.m.