do_hclust: Performs hierarchical clustering on data frame

In nicohuttmann/pOmics: Framework for proteomics data analysis

Performs hierarchical clustering on data frame

Description

Performs hierarchical clustering on data frame

Usage

do_hclust(
  data_,
  scale = T,
  distance.method = "euclidean",
  clustering.method = "complete",
  plot = T,
  input,
  output = "data_hclust"
)

Arguments

data_	data list
scale	Scale data (Z-score)?
distance.method	method to calculate distance; see ?dist for options
clustering.method	method to cluster columns and rows; see ?hclust for options
plot	generate default plot with plot_heatmap()
input	name of input data
output	name of output data

nicohuttmann/pOmics documentation built on Sept. 21, 2022, 9:28 a.m.