Man pages for nignatiadis/ihwPaper
Reproduce figures in IHW paper
| analyze_dataset | analyze_dataset: Basically performs preprocessing and then... |
| bh | bh: Wrapper for Benjamini Hochberg |
| bonf | bonf: Wrapper for Bonferroni |
| clfdr | clfdr: Cai's local fdr based method |
| continuous_wrap | Benchmarking wrapper: Given a multiple testing method,... |
| ddhf | ddhf: Greedy independent filtering |
| du_ttest_sim | t-test simulation: Simulate rowwise t-tests |
| gbh | gbh: Grouped Benjamini Hochberg |
| ihw_naive | IHW wrappers |
| lsl_pi0_est | LSL (Least-Slope) pi0 estimator |
| null_sim | Null simulation: Generate uniformly distributed p-values and... |
| pretty_legend | helper function to create nice legends |
| run_evals | run_evals: Main function to benchmark FDR methods on given... |
| scott_fdrreg | scott_fdrreg: Wrapper for FDR regression... |
| storey_qvalue | storey_qvalue: Wrapper for Storey's qvalue package |
| stratified_bh | stratified_bh: Stratified Benjamini Hochberg |
| tst_pi0_est | TST (Two-Step) pi0 estimator |
| wasserman_normal_prds_sim | Normal PRDS simulation: Covariate is effect size under... |
| wasserman_normal_sim | Normal simulation: Covariate is effect size under alternative |
