API for nikopech/lineagespot
Detection of SARS-CoV-2 lineages in wastewater samples using next-generation sequencing
| Global functions | |
|---|---|
| break_multiple_variants | Source code |
| change_AA_abbreviations | Source code |
| compute_AF | Source code |
| correct_Orf1ab_gene | Source code |
| get_lineage_report | Man page Source code |
| lineagespot | Man page Source code |
| lineagespot_hits | Man page Source code |
| merge_vcf | Man page Source code |
| read_gene_coordinates | Source code |
| uniq_variants | Man page Source code |
| vcf_to_table | Source code |
