triHeatmap: Creates a heatmap of DIE abundance across comparisons
In noush-joglekar/scisorseqr: Processes long reads for differential isoform analysis
triHeatmap R Documentation
Creates a heatmap of DIE abundance across comparisons
Description
A quick way to summarize DIE across multiple
pairwise comparisons
Usage
triHeatmap('TreeTraversal_Iso/','neuronal_cellTypes','NeuronSubtype')
Arguments
treeDir
output directory containing DiffSplicingAnalysis
comparisonList
List of comparisons to be included in plot
typeOfTest
type of test being visualized, e.g. "Exon" or "Iso".
Defaults to "Iso".
outName
plot label
Value
Directory labelled 'Visualizations' containing a triangular heatmap
of pairwise comparisons containing cell groups provided in input
See Also
DiffSplicingAnalysis
noush-joglekar/scisorseqr documentation built on March 18, 2023, 8:06 p.m.
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| triHeatmap | R Documentation |
Creates a heatmap of DIE abundance across comparisons
Description
A quick way to summarize DIE across multiple pairwise comparisons
Usage
triHeatmap('TreeTraversal_Iso/','neuronal_cellTypes','NeuronSubtype')
Arguments
treeDir |
output directory containing DiffSplicingAnalysis |
comparisonList |
List of comparisons to be included in plot |
typeOfTest |
type of test being visualized, e.g. "Exon" or "Iso". Defaults to "Iso". |
outName |
plot label |
Value
Directory labelled 'Visualizations' containing a triangular heatmap of pairwise comparisons containing cell groups provided in input
See Also
DiffSplicingAnalysis
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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