proto_basis: Tour proto for a 2D and 1D basis axes respectively

In nspyrison/spinifex: Manual Tours, Manual Control of Dynamic Projections of Numeric Multivariate Data

Tour proto for a 2D and 1D basis axes respectively

Description

Adds basis axes to the animation, the direction and magnitude of contributions of the variables to the projection space inscribed in a unit circle for 2D or rectangle of unit width for 1D.

Usage

proto_basis(
  position = c("left", "center", "right", "bottomleft", "topright", "full", "off"),
  manip_col = "blue",
  line_size = 0.6,
  text_size = 4
)

proto_basis1d(
  position = c("bottom1d", "floor1d", "top1d", "full", "off"),
  manip_col = "blue",
  segment_size = 2,
  text_size = 4,
  text_offset = -1.15
)

Arguments

position	The position, to place the basis axes relative to the data. proto_basis expects one of c("left", "center", "right", "bottomleft", "topright", "off"), defaults to "left". proto_basis1d expects one of c("bottom1d", "floor1d", "top1d", "off"). Defaults to "bottom1d".
manip_col	The color to highlight the manipulation variable with. Not applied if the tour isn't a manual tour. Defaults to "blue".
line_size	(2D bases only) the thickness of the lines used to make the axes and unit circle. Defaults to .6.
text_size	Size of the text label of the variables. Defaults to 4.
segment_size	(1D bases only) the width thickness of the rectangle bar showing variable magnitude on the axes. Defaults to 2.
text_offset	The horizontal offset of the text labels relative to the variable contributions in the basis between (-1, 1). Defaults to -1.15.

See Also

Other ggtour proto functions: append_fixed_y(), facet_wrap_tour(), ggtour(), proto_default(), proto_density(), proto_density2d(), proto_hex(), proto_highlight(), proto_hline0(), proto_origin(), proto_point(), proto_text()

Examples

library(spinifex)
dat  <- scale_sd(penguins_na.rm[, 1:4])
clas <- penguins_na.rm$species
bas  <- basis_pca(dat)
mv   <- manip_var_of(bas)

## 2D case:
mt_path <- manual_tour(bas, manip_var = mv)
ggt <- ggtour(mt_path, dat, angle = .3) +
  proto_point() +
  proto_basis()

animate_plotly(ggt)


## Customize basis
ggt2 <- ggtour(mt_path, dat) +
  proto_basis(position = "right", manip_col = "green",
              line_size = .8, text_size = 8)

animate_plotly(ggt2)


## 1D case:
bas1d     <- basis_pca(dat, d = 1)
mv        <- manip_var_of(bas1d, 3)
mt_path1d <- manual_tour(bas1d, manip_var = mv)

ggt1d <- ggtour(mt_path1d, dat, angle = .3) +
  proto_density() +
  proto_basis1d()

animate_plotly(ggt1d)


## Customized basis1d
ggt1d <- ggtour(mt_path1d, dat, angle = .3) +
  proto_density() +
  proto_basis1d(position     = "bottom",
                manip_col    = "pink",
                segment_size = 3,
                text_size    = 6,
                text_offset  = 1.2)

animate_plotly(ggt1d)

nspyrison/spinifex documentation built on Feb. 7, 2024, 1:10 p.m.