ASV_final_table: ASV table from olive trees endosphere samples.

ASV_final_tableR Documentation

ASV table from olive trees endosphere samples.

Description

Data frame containing ASV sequences, names, classification and abundance for olive trees endosphere samples. This ASV table has been cleaned from eukaryotic sequences and a cut-off has been applied from MOC community data.

Usage

ASV_final_table

Format

A data frame with 1,065 rows and 32 variables:

ASV_seqs

sequences infered with dada2

Kingdom

classification

Phylum

classification

Class

classification

Order

classification

Family

classification

Genus

classification

ASV_names

unique names for ASVs with numbers

L1-1

From L1-1 to L1-8, samples of olive trees from location

  1. The same for L2 and L3

...

Source

data from our laboratory.


nuriamw/micro4all documentation built on May 2, 2024, 9:18 a.m.