ASV_table_classified_raw: ASV table from olive trees endosphere samples without...

In nuriamw/micro4all: Microbiome for all

ASV table from olive trees endosphere samples without cleaning.

Description

Data frame containing ASV sequences, names, classification and abundance for olive trees endosphere samples. This ASV table is raw, not cleaned from eukaryotic sequences or MOCK community.

Usage

ASV_table_classified_raw

Format

A data frame with 4,396 rows and 35 variables:

ASV_seqs

sequences infered with dada2

Kingdom

classification

Phylum

classification

Class

classification

Order

classification

Family

classification

Genus

classification

ASV_names

unique names for ASVs with numbers

L1-1

From L1-1 to L1-8, samples of olive trees from location

1. The same for L2 and L3

\item

MOCK-1from MOCK-1 to MOCK-3, the three replicates from MOCK community sequencing...

Source

data from our laboratory.

nuriamw/micro4all documentation built on May 2, 2024, 9:18 a.m.