API for nvolkova/MutSim
Generating cancer mutations in genes according to mutational processes
| Global functions | |
|---|---|
| GeneFeatures-class | Man page |
| MutSim | Man page |
| MutSim-package | Man page |
| RevCom | Man page |
| RevComMutType | Man page |
| annotate_simulated_variants | Man page |
| cosine | Man page |
| gen_chrom | Man page |
| gen_chrom,GeneFeatures-method | Man page |
| gen_chrom<- | Man page |
| gen_chrom<-,GeneFeatures,character-method | Man page |
| generate_mutations | Man page |
| get_all_features | Man page |
| get_all_probabilities | Man page |
| get_chromosomes | Man page |
| min_ranges | Man page |
| name | Man page |
| name,GeneFeatures-method | Man page |
| name<- | Man page |
| name<-,GeneFeatures,character-method | Man page |
| positions | Man page |
| positions,GeneFeatures-method | Man page |
| positions<- | Man page |
| positions<-,GeneFeatures,numeric-method | Man page |
| tri.counts | Man page |
| tri.counts,GeneFeatures-method | Man page |
| tri.counts<- | Man page |
| tri.counts<-,GeneFeatures,numeric-method | Man page |
| trinucleotides | Man page |
| trinucleotides,GeneFeatures-method | Man page |
| trinucleotides<- | Man page |
| trinucleotides<-,GeneFeatures,character-method | Man page |
| upload_signatures | Man page |
