get_all_probabilities: Calculate mutation probability distribution per gene
In nvolkova/MutSim: Generating cancer mutations in genes according to mutational processes
Description
Usage
Arguments
Value
Description
Adjusts the signature mutation probabilities to the ratio of trinucleotide context
in the gene to that across the exome, which COSMIC mutation set corresponds to.
Usage
1
get_all_probabilities(geneset, gene_features, signature)
Arguments
gene_features
List of GeneFeature class objects
signature
Mutation probability distribution for a mutational process
Value
A list of numeric vectors corresponding to the mutation probability distribution across each gene.
nvolkova/MutSim documentation built on May 15, 2019, 4:48 p.m.
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Description Usage Arguments Value
Description
Adjusts the signature mutation probabilities to the ratio of trinucleotide context in the gene to that across the exome, which COSMIC mutation set corresponds to.
Usage
1 | get_all_probabilities(geneset, gene_features, signature)
|
Arguments
gene_features |
List of GeneFeature class objects |
signature |
Mutation probability distribution for a mutational process |
Value
A list of numeric vectors corresponding to the mutation probability distribution across each gene.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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