ageing_comparison: Plot comparison of double age readings

In nwfsc-assess/nwfscAgeingError: Source Code for Punt et al. (2008): Ageing Error and Imprecision

Plot comparison of double age readings

Description

Plot with circles proportional to how many double readings fell in each pair of coordinates

Usage

ageing_comparison(
  xvec,
  yvec,
  scale.pts = 2,
  col.pts = grDevices::grey(0.1, alpha = 0.5),
  col.hist = grDevices::rgb(0, 0, 0.5, alpha = 0.7),
  counts = TRUE,
  maxage = NULL,
  hist = TRUE,
  hist.frac = 0.1,
  xlab = "Age reader A",
  ylab = "Age reader B",
  title = NULL,
  png = FALSE,
  filename = "ageing_comparison.png",
  SaveFile = NULL,
  verbose = TRUE
)

Arguments

xvec	vector of values from reader A
yvec	vector of values from reader B
scale.pts	Documentation needed.
col.pts	color for points
col.hist	color for histograms
counts	include text within each bubble showing count of values?
maxage	maximum age to include in the plot (doesn't yet work well)
hist	include a histogram along each axis?
hist.frac	maximum value of histograms as fraction of maxage
xlab	label for xvec
ylab	label for yvec
title	Optional title to add at top of plot
png	Save plot to PNG file?
filename	File name for PNG file.
SaveFile	directory where plot will be saved. NULL value will make it go to working directory.
verbose	Report messages as function runs.

Author(s)

Ian G. Taylor

nwfsc-assess/nwfscAgeingError documentation built on Sept. 24, 2023, 10:19 a.m.