R/install_R_dependencies.R

if (!requireNamespace("BiocManager", quietly = TRUE))
  install.packages("BiocManager")
BiocManager::install(c('ComplexHeatmap','circlize'))


install.packages(c('ggsignif','tidyverse','igraph','data.table','plyr'))

#Following versions were used:
#ggsignif_0.5.0
#plyr_1.8.4
#data.table_1.12.2
#stringr_1.4.0
#purrr_0.3.2
#readr_1.3.1
#tidyr_0.8.3
#tibble_2.1.3
#ggplot2_3.1.1
#circlize_0.4.6
#ComplexHeatmap_2.0.0
oacar/pgsNetwork documentation built on Oct. 1, 2019, 9:15 a.m.