mica.vocabularies: Get the vocabularies

In obiba/micar: 'Mica' Data Web Portal Client

Get the vocabularies

Description

Get the taxonomy vocabularies, optionally filtered by taxonomy name and by term matching.

Usage

mica.vocabularies(
  mica,
  query = NULL,
  locale = "en",
  target = "variable",
  taxonomies = NULL,
  df = TRUE
)

Arguments

mica	A Mica object
query	The search query
locale	The language for labels (when NULL labels are not included in the result)
target	What the taxonomy is about: variable (default), dataset, study, network
taxonomies	Taxonomy names to subset. If NULL or empty all taxonomies are returned
df	Return a data.frame (default is TRUE)

See Also

Other taxonomies functions: mica.taxonomies()

Examples

## Not run: 
m <- mica.login("https://mica-demo.obiba.org")
mica.vocabularies(m,target="variable", query="cancer", locale = "en")
mica.logout(m)

## End(Not run)

obiba/micar documentation built on Nov. 8, 2023, 11:51 p.m.