runImmunePredictions: Run SingleR, scType and ProjectTILs on a Seurat object

In odavalos/scGrabBag: Useful functions for single-cell projects

Run SingleR, scType and ProjectTILs on a Seurat object

Description

Run SingleR, scType and ProjectTILs on a Seurat object

Usage

runImmunePredictions(seurat_obj, cluster_id)

Arguments

seurat_obj	Seurat object
cluster_id	Cluster ID column name

Value

Data frame with SingleR, scType and ProjectTILs predictions

Examples

# do not add quotation marks around cluster_id
## Not run: 
runImmunePredictions(seurat_obj, seurat_cluster)

## End(Not run)

odavalos/scGrabBag documentation built on Jan. 15, 2025, 11:45 p.m.