goadDifGenes: Get differentially expressed genes in GOAD datasets

In oganm/GOADquery: Queryies GOAD for differentially expressed genes

Description

Acquires differentially expressed genes in chosen GOAD datasets. Datasets are represented as ids in the GOAD database. To see which id refers to which dataset see GOADdatasets table

Usage

goadDifGenes(ids, p, foldChange = c("ALL", "UP", "DOWN"))

Arguments

ids	GOAD ids of the datasets. To see which id refers to which dataset see GOADdatasets table
p	p value threshold for selection. A threshold of 1 can be used to axtract all genes in the platforms
foldChange	direction of fold change.

oganm/GOADquery documentation built on May 24, 2019, 11:53 a.m.