n_expressoStudies | R Documentation |
The list of studies included in the neuroexpresso database. Includes studies that are not included in the gene selection and the neuroexpresso website for the sake of completion. These studies can be filtered out using ShinyNames or PyramidalDeep fields
n_expressoStudies
GSE: GSE identifier of the dataset
samples: GSM identifiers or file names of the samples included
MajorType: Does the study represent glial or neuronal cells
Neurotransmitter: Grouping of studies based on neurotransmitter release
ShinyNames: Cell type names used in the neuroexpresso.org
PyramidalDeep: internal shorter cell type names for cell types used in the study
Description: Description provided by the original authors
Age: Average age of the samples. Adult denotes an uncertain adult mouse while negative numbers denote embryonic days
Region: Brain regions that the samples were included in for the study
Platform: Microarray platform that was used for the samples
Reference: Source of the dataset
PMID: PubMed id of the paper
Normalize: Samples that are used when merging GPL339 and GPL1261 platform
Normalize2: Samples that are used when using only GPL1261 platform
Note: Notes about the quality of the sample or about the changes made on the naming or metadata
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