GetAluRepeat: Categorize RNA Editing Events by Alu and Non-Alu Repeats

In okg3/RNAEditingAnalysisTools: Conduct Differential RNA Editing Analysis

Description

GetAluRepeat categorizes RNA editing events as falling within Alu repeats, non-Alu repetitive elements, and non-repetitive regions

Usage

GetAluRepeat(x)

Arguments

x	a vector giving UCSC repeat masking data

Value

A character vector with values "Alu", "Non-Alu Repeat", and "Non-Repetitive Element"

Examples

## Not run: 
alu <- GetAluRepeat(RNAEdDataQCed$Annotation$RepMask_gid)
table(alu)

## End(Not run)

okg3/RNAEditingAnalysisTools documentation built on April 2, 2020, 5:04 a.m.