write.tnt: Write DNA data in TNT format
In oleon12/alignTools: Easy download and manage GenBank data, and alignments for phylogenetics.
Description
Usage
Arguments
Author(s)
See Also
Examples
Description
Write DNA data in TNT format for one or multiple genes
Usage
1
Arguments
genes
A list object of multiple alignments (DNAbin class) or a single DNAbin class
file
name of the file. When a list object is used, the file param will be appended to the respective name of each gene.
Author(s)
Omar Daniel Leon-Alvarado leon.alvarado12@gmail.com
See Also
Examples
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11
library(alignTools)
data(Procyonidae)
genes <- multiGenBank(Procyonidae, TRUE, FALSE)
alignment <- multiMuscle(genes, FALSE)
#See the output
write.tnt(alignment, file="Procyonidae")
write.tnt(alignment[[1]])
oleon12/alignTools documentation built on March 17, 2021, 4:57 p.m.
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Description Usage Arguments Author(s) See Also Examples
Description
Write DNA data in TNT format for one or multiple genes
Usage
1 |
Arguments
genes |
A list object of multiple alignments (DNAbin class) or a single DNAbin class |
file |
name of the file. When a list object is used, the file param will be appended to the respective name of each gene. |
Author(s)
Omar Daniel Leon-Alvarado leon.alvarado12@gmail.com
See Also
Examples
1 2 3 4 5 6 7 8 9 10 11 | library(alignTools)
data(Procyonidae)
genes <- multiGenBank(Procyonidae, TRUE, FALSE)
alignment <- multiMuscle(genes, FALSE)
#See the output
write.tnt(alignment, file="Procyonidae")
write.tnt(alignment[[1]])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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